The detailed information of tRNA gene sequence


Sequence ID>W2012196160
Genome IDVWNC01000010
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. NF [VWNC]
Start position on genome 52743
End posion on genome 52818
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggttgttaac
tRNA gene sequence 
GGCAGGGTGGCTCAGTGGCTACGGCGGAGGACTGCAAATCCTTTATTCGCGAGTTCGATT
CTCGCCCCTGCCTCCA
Downstream region at tRNA end position 
acctttcact
Secondary structure (Cloverleaf model)
>W2012196160	Cys	GCA
                   c      TCCA acctttcact
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       C T C G       G C G A G     C
    G         + | |                 T T
    C       C G G C
      T A          G     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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