The detailed information of tRNA gene sequence


Sequence ID>SRA1052851
Genome IDSRR035098.285730
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 204
End posion on genome 288
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tggctattct
tRNA gene sequence 
GGAGGGGTGGTCGAGTGGTTGATGGCTCTGGTCTTGAAAACCNGCGAGGCGAAAGCCTCC
GCGGGTTCGAATCCCGCCCCCTCGTtgc
Downstream region at tRNA end position 
ccacgagtcc
Secondary structure (Cloverleaf model)
>SRA1052851	Ser	TGA
                   t      Ttgc ccacgagtcc
                     G   G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G C G G G     C
    G       + | + |                 T T
    T       T G G C
      T G A        T     CGAGGCGAAAGCCTCC
                    C - G
                    T   N
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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