The detailed information of tRNA gene sequence


Sequence ID>W2012231460
Genome IDWBOU01000004
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexia bacterium SDU3-3 [WBOU]
Start position on genome 12101
End posion on genome 12177
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccctcccgcT
tRNA gene sequence 
GGGACGGTAGCTCAAAGGAAGAGCGGCGGGTTCATAACCCGAGGGGTGGGGGTTCGAGTC
CCCCGCGTCCCGCCC
Downstream region at tRNA end position 
Aatcgacaca
Secondary structure (Cloverleaf model)
>W2012231460	Met	CAT
                   T      GCCC Aatcgacaca
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G   G          T G
                    T     C C C C C     A
        A A        A      | | | | |     G
      A     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     GGGGT
                    G   A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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