The detailed information of tRNA gene sequence


Sequence ID>SRA1053177
Genome IDSRR035098.356651
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 139
End posion on genome 214
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagcggccat
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCTGGAGTTCGAGT
CTCCATGCCCCTGCCA
Downstream region at tRNA end position 
ggccctcgat
Secondary structure (Cloverleaf model)
>SRA1053177	Trp	CCA
                   t      GCCA ggccctcgat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     A C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       T G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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