The detailed information of tRNA gene sequence


Sequence ID>SRA1053273
Genome IDSRR035098.371228
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 102
End posion on genome 10
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagcaataaa
tRNA gene sequence 
GGAAGCGTGGCTGAGTGGCCGAAGGCAGCTCCTTGCTAAGGAGTCGGGTGTGTAAAAAGC
GCCCCGTGGGTTCAAATCCCACCGCTTCCTCCA
Downstream region at tRNA end position 
aagttataan
Secondary structure (Cloverleaf model)
>SRA1053273	Ser	GCT
                   a      TCCA aagttataan
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      C G A        A     CGGGTGTGTAAAAAGCGCCCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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