The detailed information of tRNA gene sequence


Sequence ID>SRA1053286
Genome IDSRR035098.374622
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 196
End posion on genome 107
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagaaacata
tRNA gene sequence 
GGACCTGTGGCTGAGCGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATACCTTTGCGGGTA
TCGAGGGTTCGAATCCCTCCGGGTCCGCCA
Downstream region at tRNA end position 
gaaccccaga
Secondary structure (Cloverleaf model)
>SRA1053286	Ser	GCT
                   a      GCCA gaaccccaga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACCTTTGCGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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