The detailed information of tRNA gene sequence


Sequence ID>SRA1053320
Genome IDSRR035098.382097
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 7
End posion on genome 81
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnatgtat
tRNA gene sequence 
GTTTCGATAGTGTAATTGGCAACACTTTGATCTCCAAAATCAACATTCTAGGTTCAAATC
CTAGTCGGGACGCCA
Downstream region at tRNA end position 
acagttaatt
Secondary structure (Cloverleaf model)
>SRA1053320	Trp	CCA
                   t      GCCA acagttaatt
                     G - C
                     T - A
                     T + G
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     G A T C C     A
      T A A        A      | | | | |     A
    T       T G T G       C T A G G     C
    G       | | | |                 T T
    G       A C A C
      C A          T     CATT
                    T - A
                    T - A
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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