The detailed information of tRNA gene sequence


Sequence ID>SRA1053327
Genome IDSRR035098.383106
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 322
End posion on genome 397
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaatcataT
tRNA gene sequence 
AGCGGGATAGAGCAGTCTGGTAGCTTGTAAGGCTCATAATCTTAAGGTCACAGGTTCAAA
TCCTGTTCCCGCCAGta
Downstream region at tRNA end position 
atatcacaaa
Secondary structure (Cloverleaf model)
>SRA1053327	Met	CAT
                   T      AGta atatcacaaa
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | +                 T T
    G       G C T T
      G T A        G     AGGTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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