The detailed information of tRNA gene sequence


Sequence ID>SRA1053417
Genome IDSRR035098.401809
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 206
End posion on genome 116
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcgcccccT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGCAACTTC
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
ctttgatgcc
Secondary structure (Cloverleaf model)
>SRA1053417	Ser	GCT
                   T      GTtt ctttgatgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGCAACTTCTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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