The detailed information of tRNA gene sequence


Sequence ID>SRA1053552
Genome IDSRR035098.434643
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 274
End posion on genome 363
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcgcaatgg
tRNA gene sequence 
GGAGACGTCGCATAGAGGCCGATTGCACTAGCTTGCTAAGCTGGAGAACCTGCAAGGGTT
CCGAGGGTTCGAATCCCTCCGTCTCCGCTA
Downstream region at tRNA end position 
cccgccaaaa
Secondary structure (Cloverleaf model)
>SRA1053552	Ser	GCT
                   g      GCTA cccgccaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G         | | |                 T T
    C       T T G C
      C G A        A     AGAACCTGCAAGGGTTCC
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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