The detailed information of tRNA gene sequence


Sequence ID>SRA1053581
Genome IDSRR035098.443529
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 217
End posion on genome 292
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttccgcttt
tRNA gene sequence 
GGGCCTGTGGCGCAGCTGGTAGCGCACCTGCATGGCATGCAGGGGGGTCAGGGGGTTCGA
GTCCCCTCAGGTCCACtt
Downstream region at tRNA end position 
tttgctcgcg
Secondary structure (Cloverleaf model)
>SRA1053581	Ala	GGC
                   t      ACtt tttgctcgcg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        G      + | | | |     G
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGGTCA
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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