The detailed information of tRNA gene sequence


Sequence ID>SRA1053859
Genome IDSRR035098.517613
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 136
End posion on genome 48
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgttttttT
tRNA gene sequence 
GGAAAGATGGCTGAGCGGCCTAAGGCACGTCCCTGCTAAGGACGAGTACTCGTAAGGGTA
CCGAGGGTTCGAATCCCTCTTTTTCCGAat
Downstream region at tRNA end position 
ttcttcaaaa
Secondary structure (Cloverleaf model)
>SRA1053859	Ser	GCT
                   T      GAat ttcttcaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      C T A        A     AGTACTCGTAAGGGTACC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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