The detailed information of tRNA gene sequence


Sequence ID>SRA1053889
Genome IDSRR035098.526396
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 125
End posion on genome 215
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaggcttcgc
tRNA gene sequence 
GGAAAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGTTCATAGCCC
ACCGAGGGTTCGAATCCCTCCTTTTCCGCCA
Downstream region at tRNA end position 
gtatacccta
Secondary structure (Cloverleaf model)
>SRA1053889	Ser	GGA
                   c      GCCA gtatacccta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGTTCATAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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