The detailed information of tRNA gene sequence


Sequence ID>W2012308954
Genome IDWEIC01000009
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAmylibacter sp. SFDW26 [WEIC]
Start position on genome 6234
End posion on genome 6310
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcgcttctgg
tRNA gene sequence 
CGCGGGGTAGAGCAGCCCGGTAGCTCATCAGGCTCATAACCTGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aaagcttttt
Secondary structure (Cloverleaf model)
>W2012308954	fMet	CAT
                   g      ACCA aaagcttttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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