The detailed information of tRNA gene sequence


Sequence ID>SRA1053951
Genome IDSRR035099.14992
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 119
End posion on genome 30
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaactaattt
tRNA gene sequence 
GGAGAGGTCGCATAGCTCGGTCGAGTGCGCGTGTTTGGAGTACACGTAATCCGTAAGGAT
TCGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tacttcgtca
Secondary structure (Cloverleaf model)
>SRA1053951	Ser	GGA
                   t      GCCA tacttcgtca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    T C G A        C      | | | | |     G
  C         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAATCCGTAAGGATTC
                    C - G
                    G - C
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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