The detailed information of tRNA gene sequence


Sequence ID>SRA1053997
Genome IDSRR035099.28665
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 541
End posion on genome 450
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAGAAATGGCCGAGTGGCTGAAGCGCTCGCCTGCTAAGCGAGTATGGGGATTTAAACTC
CATCGAGAGTTCGAATCTCTCTTTCTCCGCCA
Downstream region at tRNA end position 
tttataagcg
Secondary structure (Cloverleaf model)
>SRA1053997	Ser	GCT
                   c      GCCA tttataagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G           | |                 T T
    C       A A G C
      T G          G     TATGGGGATTTAAACTCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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