The detailed information of tRNA gene sequence


Sequence ID>SRA1054016
Genome IDSRR035099.35812
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 439
End posion on genome 350
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccatacaaat
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGTCCGCTTATGCGGA
CCGGGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
gttgtcaata
Secondary structure (Cloverleaf model)
>SRA1054016	Ser	CGA
                   t      GCCA gttgtcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTCCGCTTATGCGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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