The detailed information of tRNA gene sequence


Sequence ID>SRA1054088
Genome IDSRR035099.54322
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 158
End posion on genome 231
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tacaaacatc
tRNA gene sequence 
GGGGACGTAGTATAACCTGGCAGAATGGCCGCCTCCAGAGCGGCAGATGGGGGTTCAAAT
CCTTCCGTCCTCACtt
Downstream region at tRNA end position 
tgttcgtttc
Secondary structure (Cloverleaf model)
>SRA1054088	Trp	CCA
                   c      ACtt tgttcgtttc
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T T C C     A
      C A A        A      | + + | |     A
    C       T A T G       G G G G G     C
    T       +   | +                 T T
    G       G A A T
      G C A        G     AGAT
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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