The detailed information of tRNA gene sequence


Sequence ID>W2012326515
Genome IDWHJI01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMassilia sp. CCM 8734 [WHJI]
Start position on genome 65212
End posion on genome 65125
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacgattata
tRNA gene sequence 
GGTAGCATGGCTGAGAGGCCGAAAGCAACGGCTTGCTAAGCCGTAGAGTGGAAACGCTCC
GCGCGTTCGAATCGCGCTGCTACCGCCA
Downstream region at tRNA end position 
attttctatc
Secondary structure (Cloverleaf model)
>W2012326515	Ser	GCT
                   a      GCCA attttctatc
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C G C G C     A
      A G A        G      | | | | |     G
    G       G T C G       G C G C G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     AGAGTGGAAACGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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