The detailed information of tRNA gene sequence


Sequence ID>SRA1054126
Genome IDSRR035099.65834
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 93
End posion on genome 167
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acttatactt
tRNA gene sequence 
AGGCCCATAGTGAAATGGCTATCACCATGGTCTCCAAAACCATTATTTGAGGTTCGAATC
CTCATGGGCCTGCAA
Downstream region at tRNA end position 
aaaagctatt
Secondary structure (Cloverleaf model)
>SRA1054126	Trp	CCA
                   t      GCAA aaaagctatt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     A C T C C     A
      T A A        A      | | | | |     G
    G       A G T G       T G A G G     C
    G       | | | |                 T T
    C       T C A C
      T A          C     TATT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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