The detailed information of tRNA gene sequence


Sequence ID>SRA1054174
Genome IDSRR035099.76210
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 314
End posion on genome 223
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagttaaga
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCACCCTGCTAAGGTGTTGTACCCTTTACCGGG
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttaaataaa
Secondary structure (Cloverleaf model)
>SRA1054174	Ser	GCT
                   a      GCCA gttaaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTACCCTTTACCGGGTACC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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