The detailed information of tRNA gene sequence


Sequence ID>SRA1054213
Genome IDSRR035099.85535
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 478
End posion on genome 389
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nncggcactg
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCCCCGGGGACTTAAAATCCCCGTGTTCAGCAATGA
GCGTACGGGTTCGATTCCCGTCTTCGGCACtc
Downstream region at tRNA end position 
tgatacaggc
Secondary structure (Cloverleaf model)
>SRA1054213	Leu	TAA
                   g      ACtc tgatacaggc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T G C C C     A
    T T A A        G      | | | | |     G
  G         G G C G       A C G G G     C
  G           |   |                 T T
  T         G C C C
    A G A C        C     GTGTTCAGCAATGAGCGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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