The detailed information of tRNA gene sequence


Sequence ID>SRA1054230
Genome IDSRR035099.88328
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 247
End posion on genome 322
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttaaaaaat
tRNA gene sequence 
GGTGTCGTAGTTCAATTGGTTAGAATACCGGCCTGTCACGCCGGGGTTGCGAGTTCGAGT
CTCGTCGATACCGCCA
Downstream region at tRNA end position 
gaaggcctca
Secondary structure (Cloverleaf model)
>SRA1054230	Asp	GTC
                   t      GCCA gaaggcctca
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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