The detailed information of tRNA gene sequence


Sequence ID>SRA1054333
Genome IDSRR035099.108232
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 342
End posion on genome 250
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttcaattgt
tRNA gene sequence 
GGAGGAGTGACTGAGTGGCCGAAAGTGGCGGTCTTGAAAACCGTTTGACCTTTAAACGGG
GTCCCGTGGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
aaccatacgg
Secondary structure (Cloverleaf model)
>SRA1054333	Ser	TGA
                   t      GCCA aaccatacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G T C A       G T G G G     C
    G         | | |                 T T
    C       A A G T
      C G A        G     TTGACCTTTAAACGGGGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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