The detailed information of tRNA gene sequence


Sequence ID>SRA1054484
Genome IDSRR035099.144184
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 341
End posion on genome 417
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gagataaagt
tRNA gene sequence 
AGGCTAGTAGCTCCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGTAGGTTCGAA
TCCTACCTGGCCTGCCA
Downstream region at tRNA end position 
cataaagata
Secondary structure (Cloverleaf model)
>SRA1054484	Trp	CCA
                   t      GCCA cataaagata
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T A
                    T     C A T C C     A
      A A C        A      | | | | |     G
    T       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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