The detailed information of tRNA gene sequence


Sequence ID>SRA1054514
Genome IDSRR035099.150715
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 461
End posion on genome 386
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGTACTAGCATGGCATGCTAGGGGTCGTCGGTTCGAAC
CCGTCCAGCTCCACCA
Downstream region at tRNA end position 
tttcgacttc
Secondary structure (Cloverleaf model)
>SRA1054514	Ala	GGC
                   n      ACCA tttcgacttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C A
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | +                 T T
    G       G A G T
      G A          A     GGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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