The detailed information of tRNA gene sequence


Sequence ID>SRA1054537
Genome IDSRR035099.158199
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 233
End posion on genome 142
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cattgaatta
tRNA gene sequence 
GGAGAGGTAGTCAAGTGGTCCAAGACACCGGTTTGCTAAACCGGCGAGGGGTTCACGCTC
CTCCGCGAGTTCGAATCTCGCCCTCTCCTCCA
Downstream region at tRNA end position 
ccttgcgaac
Secondary structure (Cloverleaf model)
>SRA1054537	Ser	GCT
                   a      TCCA ccttgcgaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    G       A C T G       G C G A G     C
    G         | | |                 T T
    T       A G A C
      C C A        A     CGAGGGGTTCACGCTCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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