The detailed information of tRNA gene sequence


Sequence ID>SRA1054545
Genome IDSRR035099.158981
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 327
End posion on genome 231
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attacgttgt
tRNA gene sequence 
GGAAGTGGGTTGTGTCTGGTGACACTCCTGGACTTCAAATCCAGTGGGAGGTGTTAATAG
CGTCTCTGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ctttcgaatg
Secondary structure (Cloverleaf model)
>SRA1054545	SeC	TCA
                   t      GCCA ctttcgaatg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    G     T A C C C     A
      T C T        T      + | | | |     G
    G       G T G T       G T G G G     C
    G       | | |                   T T
    T       C A C T
      G A          C     TGGGAGGTGTTAATAGCGTCTCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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