The detailed information of tRNA gene sequence


Sequence ID>SRA1054619
Genome IDSRR035099.174793
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 57
End posion on genome 130
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgaaacac
tRNA gene sequence 
AGGCGCGTAGTTAAGTGGTATAACATCGGTCTCCAAAACCGAGGTCGAGGGTTCGATTCC
TTCCGCGCCTGCCA
Downstream region at tRNA end position 
aacagtgtac
Secondary structure (Cloverleaf model)
>SRA1054619	Trp	CCA
                   c      GCCA aacagtgtac
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T T
                    T     C T T C C     A
        G A        A      | | + | |     G
      T     A T T G       G A G G G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     GGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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