The detailed information of tRNA gene sequence


Sequence ID>SRA1054721
Genome IDSRR035099.195408
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 44
End posion on genome 117
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttgaaataa
tRNA gene sequence 
GCGGACATAGTATAGTGGAAGTACAAGGGTCTCCAAAGCTTTTAGCGGGAGTTCGATTCT
CTCTGTCCGTGCAA
Downstream region at tRNA end position 
ccaatgttat
Secondary structure (Cloverleaf model)
>SRA1054721	Trp	CCA
                   a      GCAA ccaatgttat
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T T
                    T     C T C T C     A
        G A        A      | + | | |     G
      T     T A T G       G G G A G     C
      G     + | | |                 T T
      G     G T A C
        A A        A     TAGC
                    A - T
                    G + T
                    G + T
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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