The detailed information of tRNA gene sequence


Sequence ID>SRA1054727
Genome IDSRR035099.198811
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 235
End posion on genome 325
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccattaatac
tRNA gene sequence 
GGAGAGTTACTCAAGTGGCTTAAGAGACTGGTCTTGAAAACCAGCAGGTCGAGAAATCGT
CGCAGGGGTTCAAATCCCTTACTCTCCGCCA
Downstream region at tRNA end position 
tatacccatt
Secondary structure (Cloverleaf model)
>SRA1054727	Ser	TGA
                   c      GCCA tatacccatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      T G A        A      | + | | |     A
    G       A C T C       A G G G G     C
    G         | | |                 T T
    C       A G A G
      T T A        A     CAGGTCGAGAAATCGTCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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