The detailed information of tRNA gene sequence


Sequence ID>SRA1000458
Genome IDSRR001042.167810
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 11
End posion on genome 85
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ataaaaggat
tRNA gene sequence 
GCCGCCTTCGAATAATGGTTAATTCTGGAGTTTGTGGAACTCTCAATTTTGGTTCAATTC
CAAAAGGCGGTACCA
Downstream region at tRNA end position 
caacgtcttc
Secondary structure (Cloverleaf model)
>SRA1000458	His	GTG
                   t      ACCA caacgtcttc
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     A A A C C     A
      T A A        C      | | | | |     A
    G       T A A G       T T T G G     C
    G       | | | |                 T T
    T       A T T C
      T A          T     CAAT
                    G + T
                    G - C
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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