The detailed information of tRNA gene sequence


Sequence ID>SRA1000573
Genome IDSRR001044.103081
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 2
End posion on genome 74
Amino Acid Stop
Anticodon CTA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGTTCGGTAGGGTAATGGCAACCCAGACATACTCTAAATATGCAAGATATCGGTTCGAAT
CCGATCCGAGCCAttc
Downstream region at tRNA end position 
tcacaacttt
Secondary structure (Cloverleaf model)
>SRA1000573	Stop	CTA
                   c      Attc tcacaacttt
                     G - C
                     G - C
                     T + G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     T A G C C     A
        A A        A      | | | | |     G
      T     T G G G       A T C G G     C
      G     | | | |                 T T
      G     A C C C
        C A        A     CAAGAT
                    G   G
                    A - T
                    C   A
                    A - T
                    T - A
                  A       A
                  C       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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