The detailed information of tRNA gene sequence


Sequence ID>SRA1000608
Genome IDSRR001044.216886
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 3
End posion on genome 79
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GCCCTTGTCATCTAATTGGTTTAGGATAGTTGCTTCTCACGCAGCAGATTGGAGTTCGAG
CCTCCATAAGGGTACTA
Downstream region at tRNA end position 
gaaaggcaaa
Secondary structure (Cloverleaf model)
>SRA1000608	Glu	CTC
                   t      ACTA gaaaggcaaa
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     G + T          C G
                    T     A C C T C     A
    T T A A        C      | | | | |     G
  G         T C T A       T G G A G     C
  G         + | | |                 T T
  T         G G A T
    T T A          A     AGAT
                    G - C
                    T + G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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