The detailed information of tRNA gene sequence


Sequence ID>SRA1001043
Genome IDSRR001052.7030
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 97
End posion on genome 15
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnntattaaa
tRNA gene sequence 
GATGAGGTGGCTGAGTATGGTAAAGCGACAATTTGCTAAATTGTTGGGTATATCCCACAT
GGGTTCAAATCCCATTCTTATTCgtt
Downstream region at tRNA end position 
agataaatat
Secondary structure (Cloverleaf model)
>SRA1001043	Ser	GCT
                   a      Cgtt agataaatat
                     G + T
                     A - T
                     T - A
                     G + T
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     A
    A       G T C G       A T G G G     C
    T         | | |                 T T
    G       A A G C
      G T A        G     TGGGTATATCCCAC
                    A - T
                    C - G
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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