The detailed information of tRNA gene sequence


Sequence ID>SRA1001051
Genome IDSRR001052.33836
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 20
End posion on genome 103
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgatggtgt
tRNA gene sequence 
GGAAGGGTGACAGAGGGGTCTATTGTGTCTGTTTTGAAAACAGAGGCCAGAAATGGTTCG
TGGGTTCGAATCTCACCCCTTCTTttt
Downstream region at tRNA end position 
aagtcttaat
Secondary structure (Cloverleaf model)
>SRA1001051	Ser	TGA
                   t      Tttt aagtcttaat
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      G G A        G      | | | + |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      C T A        G     GGCCAGAAATGGTTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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