The detailed information of tRNA gene sequence


Sequence ID>W2012411322
Genome IDWPHO01000021
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAgrobacterium vitis CG964 [WPHO]
Start position on genome 46957
End posion on genome 47032
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gcgccaggcc
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCTGGCGGCTCATAACCGCTTGGTTGGGAGTTCGAGT
CTCTCCAGGCCCACCA
Downstream region at tRNA end position 
ctatccttgc
Secondary structure (Cloverleaf model)
>W2012411322	Ile2	CAT
                   c      ACCA ctatccttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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