The detailed information of tRNA gene sequence


Sequence ID>SRA1001153
Genome IDSRR001052.231561
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 106
End posion on genome 36
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggcagctca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
tgggtaaaaa
Secondary structure (Cloverleaf model)
>SRA1001153	Met	CAT
                   a      Cttt tgggtaaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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