The detailed information of tRNA gene sequence


Sequence ID>SRA1001175
Genome IDSRR001052.276221
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 10
End posion on genome 83
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attattgaaA
tRNA gene sequence 
TGTGGAGTTGACTAAGGGTTGGTCGCCAGGTTCATCCCCTGGACTATGTAGGTTCGACTC
CTACCTCCACTTGaa
Downstream region at tRNA end position 
aattaatagg
Secondary structure (Cloverleaf model)
>SRA1001175	Met	CAT
                   A      TGaa aattaatagg
                     T   T
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     C A T C C     A
        A A        T      | | | | |     G
      G     T C A G       G T A G G     C
      G     + | | |                 T T
      G     G G T C
        T T        G     ACTAT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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