The detailed information of tRNA gene sequence


Sequence ID>SRA1001181
Genome IDSRR001052.290717
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 10
End posion on genome 82
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ntttataatc
tRNA gene sequence 
GCCTGTTTAGCTTAATTGGTAAAGTATACTGCTCATGACAGTAATTATAAAAGTTCAAGT
CTTTTGATAGGTAagt
Downstream region at tRNA end position 
agtaaatgga
Secondary structure (Cloverleaf model)
>SRA1001181	Met	CAT
                   c      Aagt agtaaatgga
                     G + T
                     C - G
                     C - G
                     T - A
                     G + T
                     T - A
                     T + G          T G
                    T     T T T T C     A
      T A A        A      | | | | |     A
    T       T T C G       A A A A G     C
    G       | | | +                 T T
    G       A A G T
      T A          A     ATTAT
                    T - A
                    A - T
                    C - G
                    T - A
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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