The detailed information of tRNA gene sequence


Sequence ID>SRA1001184
Genome IDSRR001052.294393
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 10
End posion on genome 85
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taattctaaA
tRNA gene sequence 
GAACTGGTAGCTTAAGGGGTGAAGCTTATTGCTCATAACAATAAAAAAAGTTGGTTCGAT
TCCAATTCAGTTTTTtg
Downstream region at tRNA end position 
ggatcggatt
Secondary structure (Cloverleaf model)
>SRA1001184	Met	CAT
                   A      TTtg ggatcggatt
                     G + T
                     A - T
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T A A C C     A
      G A A        A      + | | | |     G
    G       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T G          T     AAAAAA
                    T - A
                    A - T
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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