The detailed information of tRNA gene sequence


Sequence ID>SRA1001255
Genome IDSRR001060.6194
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 95
End posion on genome 23
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tagcgggtgc
tRNA gene sequence 
AGTCCGTTGGGGTAGTGGCCAATCCTCTCGGATTCTGGGTCCGAGGACCCTGGTTCGAAT
CCAGGACGGACTAtgt
Downstream region at tRNA end position 
tggggtgcat
Secondary structure (Cloverleaf model)
>SRA1001255	Gln	CTG
                   c      Atgt tggggtgcat
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G G A C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C T G G     C
    G         | | +                 T T
    C       T C C T
      C A A        C     GGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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