The detailed information of tRNA gene sequence


Sequence ID>SRA1001259
Genome IDSRR001060.10510
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 103
End posion on genome 32
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nctgtaacac
tRNA gene sequence 
GGGACCGTGGGGTAGTGGTATCCTCTGCCGCTGGGGGCGGCAGGACTCGAGTTCGATTCT
CGGCGGTCCCACtc
Downstream region at tRNA end position 
actcctgcgt
Secondary structure (Cloverleaf model)
>SRA1001259	Pro	GGG
                   c      ACtc actcctgcgt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T T
                    T     G G C T C     A
        G A        G      + | | | |     G
      T     T G G G       T C G A G     C
      G       | | +                 T T
      G     T C C T
        T A        C     GGAC
                    T - A
                    G - C
                    C - G
                    C - G
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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