The detailed information of tRNA gene sequence


Sequence ID>SRA1001301
Genome IDSRR001063.55794
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 26
End posion on genome 113
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attatttaaT
tRNA gene sequence 
AGAGAATTGGCTGAGTGGTTTAAGGCGGTAAGTTTGAGTTTTATTAGGTTGTATAAACTG
CATCCGTTCAAATCGGATATTCTCTGTtt
Downstream region at tRNA end position 
aaaagagtan
Secondary structure (Cloverleaf model)
>SRA1001301	Ser	TGA
                   T      GTtt aaaagagtan
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T A G G C     A
      T G A        G      | | | | |     A
    G       G T C G       A T C C G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TAGGTTGTATAAACTGC
                    G + T
                    T - A
                    A - T
                    A - T
                    G + T
                  T       T
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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