The detailed information of tRNA gene sequence


Sequence ID>SRA1001496
Genome IDSRR001067.20470
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 82
End posion on genome 12
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ctgaccttac
tRNA gene sequence 
TAGGAAGTGGTGTAGTGGAAGCACTGAGAGTTTTGATCTCTCCAGGTAGGGTTCGACTCC
CTTCTTTCTAAgga
Downstream region at tRNA end position 
gctgggagnn
Secondary structure (Cloverleaf model)
>SRA1001496	Gln	TTG
                   c      Agga gctgggagnn
                     T - A
                     A - T
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C          T C
                    T     T T C C C     A
        G A        G        | | | |     G
      T     T G T G       T A G G G     C
      G     + | | |                 T T
      G     G C A C
        A A        T     CAGG
                    G - C
                    A - T
                    G - C
                    A - T
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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