The detailed information of tRNA gene sequence


Sequence ID>SRA1001640
Genome IDSRR001076.9213
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 9
End posion on genome 83
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nntattatag
tRNA gene sequence 
CGGGTAGTAGTCGCGGGGTGCGACGCTTGCATTGGAAGCAAGAGGCGGAGAGTTCGACCC
TCTCCTACCCGACGA
Downstream region at tRNA end position 
gagagactgt
Secondary structure (Cloverleaf model)
>SRA1001640	Pro	TGG
                   g      ACGA gagagactgt
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          C C
                    T     C T C T C     A
        G C        A      | | | | |     G
      G     G C T G       G A G A G     C
      G     | | | |                 T T
      G     C G A C
        T G        G     AGGCG
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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