The detailed information of tRNA gene sequence


Sequence ID>SRA1001656
Genome IDSRR001076.55872
Search identical group
Phylum/ClassTilapia Farm, viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) (SRP000164)
Species
Start position on genome 39
End posion on genome 121
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcctgccaaT
tRNA gene sequence 
GGGGAAATGGTGGAATGGTATACACGGTAGTTTCAAAAACTAATTGCTTAACAGCATGCG
GGTTCGAGTCCCGCTTTCCCAAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001656	Leu	CAA
                   T      Annn nnnnnnnnnn
                     G   A
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G G T G       G C G G G     C
    G         | | |                 T T
    T       A C A C
      A T          G     TTGCTTAACAGCAT
                    G   A
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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