The detailed information of tRNA gene sequence


Sequence ID>SRA1001672
Genome IDSRR001079.37020
Search identical group
Phylum/ClassCoral Stressors,viral fraction from whole Porites compressa tissue extracts; a temperature stressor experiment (SRP000167)
Species
Start position on genome 124
End posion on genome 54
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TGTAGAGAAGACGAATGGTGAGTCATCGGGCTCATGCCCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
tgggtaaaaa
Secondary structure (Cloverleaf model)
>SRA1001672	Met	CAT
                   n      Cttt tgggtaaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        A      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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