The detailed information of tRNA gene sequence


Sequence ID>SRA1001840
Genome IDSRR001308.85590
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 122
End posion on genome 198
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttgaatgaat
tRNA gene sequence 
GGGTCGCTAGCAATCTGGTTGATTGCAACAAGCTGTTAACTTGTGCGAGCAGGGTTCGAT
CCCCTGGCGGCCCGCTA
Downstream region at tRNA end position 
tgatccacta
Secondary structure (Cloverleaf model)
>SRA1001840	Asn	GTT
                   t      GCTA tgatccacta
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     C - G          C T
                    T     G T C C C     A
      T C T        A      | | | | |     G
    G       A A C G       C A G G G     C
    G       | | | |                 T T
    T       T T G C
      T G A        A     GCGAG
                    A - T
                    C - G
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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