The detailed information of tRNA gene sequence


Sequence ID>SRA1001870
Genome IDSRR001308.102414
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 239
End posion on genome 155
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
taaaattttT
tRNA gene sequence 
AAATACTTGGCGGAATAGGTAGACGCGACAGACTCAAAATCTGTTTCTTTATAAGAGTAT
TGGTTCAAGTCCAGTAGTAATAAAaa
Downstream region at tRNA end position 
aatattaatt
Secondary structure (Cloverleaf model)
>SRA1001870	Leu	CAA
                   T      AAaa aatattaatt
                     A   A
                     A - T
                     A   A
                     T - A
                     A - T
                     C - G
                     T - A          T G
                    T     T G A C C     A
      T A A        G      | + | | |     A
    A       G G C G       A T T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTTATAAGAGT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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